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  5. SymbC1.scaffold1337.4

SymbC1.scaffold1337.4 (1337.4)


Aliases : 1337.4

Description : Ribosomal protein L40e; Ubiquitin-like domain [Interproscan].


Gene families : OG_01_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold1337.4
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
EOD36186 No alias Ubiquitin-like domain [Interproscan]. 0.03 OrthoFinder
EOD38729 No alias Ubiquitin-like domain [Interproscan]. 0.03 OrthoFinder
PTI_08G01060.1 No alias Ubiquitin-like domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_89924 89924 Ubiquitin-like domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_90271 90271 Ubiquitin-like domain [Interproscan]. 0.01 OrthoFinder
XM_002508129.1 MICPUN_60632, 60632 Ubiquitin 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001975 Ribosomal_L40e 78 127
IPR000626 Ubiquitin-like_dom 3 74
No external refs found!