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  5. SymbC1.scaffold13308.2

SymbC1.scaffold13308.2 (13308.2)


Aliases : 13308.2

Description : Hypothetical protein


Gene families : OG_01_0000827 (OrthoFinder) Phylogenetic Tree(s): OG0000827_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold13308.2

Target Alias Description ECC score Gene Family Method Actions
Sro1626_g286880.1 Contig1454.g13329 BTB/POZ domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold1784.1 1784.1 C-5 cytosine methyltransferase; Reverse transcriptase... 0.03 OrthoFinder
SymbC1.scaffold2650.6 2650.6 BTB/Kelch-associated; BTB/POZ domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold294.3 294.3 BTB/Kelch-associated [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold74.3 74.3 C-5 cytosine methyltransferase [Interproscan]. 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003919 FMN adenylyltransferase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0005539 glycosaminoglycan binding IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008531 riboflavin kinase activity IEP Enrichment
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
MF GO:0042834 peptidoglycan binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!