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Aliases : 1330.3
Description : Choline transporter-like [Interproscan].
Gene families : OG_01_0001533 (OrthoFinder) Phylogenetic Tree(s): OG0001533_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: SymbC1.scaffold1330.3 | |
| Cluster | HCCA: Cluster_97 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SymbC1.scaffold3559.3 | 3559.3 | Kringle; Adenylate kinase; Choline transporter-like... | 0.04 | OrthoFinder | |
| SymbC1.scaffold5305.2 | 5305.2 | Kringle; Choline transporter-like [Interproscan]. | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | Enrichment |
| MF | GO:0003989 | acetyl-CoA carboxylase activity | IEP | Enrichment |
| MF | GO:0004089 | carbonate dehydratase activity | IEP | Enrichment |
| MF | GO:0004451 | isocitrate lyase activity | IEP | Enrichment |
| MF | GO:0004843 | thiol-dependent deubiquitinase | IEP | Enrichment |
| MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
| CC | GO:0005576 | extracellular region | IEP | Enrichment |
| CC | GO:0005887 | integral component of plasma membrane | IEP | Enrichment |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Enrichment |
| BP | GO:0006811 | ion transport | IEP | Enrichment |
| MF | GO:0008242 | omega peptidase activity | IEP | Enrichment |
| MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
| MF | GO:0015099 | nickel cation transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015675 | nickel cation transport | IEP | Enrichment |
| BP | GO:0015977 | carbon fixation | IEP | Enrichment |
| MF | GO:0016421 | CoA carboxylase activity | IEP | Enrichment |
| MF | GO:0016829 | lyase activity | IEP | Enrichment |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Enrichment |
| MF | GO:0016833 | oxo-acid-lyase activity | IEP | Enrichment |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Enrichment |
| MF | GO:0016836 | hydro-lyase activity | IEP | Enrichment |
| MF | GO:0016885 | ligase activity, forming carbon-carbon bonds | IEP | Enrichment |
| MF | GO:0016984 | ribulose-bisphosphate carboxylase activity | IEP | Enrichment |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Enrichment |
| MF | GO:0030247 | polysaccharide binding | IEP | Enrichment |
| MF | GO:0030248 | cellulose binding | IEP | Enrichment |
| CC | GO:0031226 | intrinsic component of plasma membrane | IEP | Enrichment |
| BP | GO:0035444 | nickel cation transmembrane transport | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0101005 | deubiquitinase activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007603 | Choline_transptr-like | 380 | 733 |
| No external refs found! |