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  5. SymbC1.scaffold1310.5

SymbC1.scaffold1310.5 (1310.5)


Aliases : 1310.5

Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0002225 (OrthoFinder) Phylogenetic Tree(s): OG0002225_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1310.5
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_59209 59209 RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000522.1_cds_GFH12624.1_7101 HaLaN_08342, GFH12624 C2 calcium-dependent membrane targeting 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 72 140
No external refs found!