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  5. SymbC1.scaffold131.10

SymbC1.scaffold131.10 (131.10)


Aliases : 131.10

Description : ABC-2 type transporter [Interproscan].


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold131.10
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020614.26 tig00020614_g12136.t1 ABC transporter G family member 9 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cz06g03250.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
PTI_02G01550.1 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold3153.5 3153.5 ABC-2 type transporter [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54121 54121 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59475.1_6280 PRW59475 Atp-binding cassette superfamily 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45485.1_1411 PRW45485 ABC transporter G family member 22 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 130 208
No external refs found!