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  5. SymbC1.scaffold1296.6

SymbC1.scaffold1296.6 (1296.6)


Aliases : 1296.6

Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1296.6
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001286.17 tig00001286_g8034.t1 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder
Cpa|evm.model.tig00021374.9 tig00021374_g21091.t1 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder
Cre06.g288450 30778465 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder
Sro524_g159890.1 Contig202.g2386 Receptor homology region, transmembrane domain- and RING... 0.01 OrthoFinder
lcl|BLLF01000674.1_cds_GFH13993.1_8470 HaLaN_09965, GFH13993 RING-type domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58632.1_7739 PRW58632 E3 ubiquitin-ligase AIP2 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 259 297
No external refs found!