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  5. SymbC1.scaffold1291.13

SymbC1.scaffold1291.13 (1291.13)


Aliases : 1291.13

Description : Ribosomal protein L36e [Interproscan].


Gene families : OG_01_0003108 (OrthoFinder) Phylogenetic Tree(s): OG0003108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1291.13
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021493.69 tig00021493_g21908.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder
Cre12.g484050 30792099, RPL36 Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder
Cz06g33040.t1 No alias Ribosomal protein L36e [Interproscan]. 0.07 OrthoFinder
Dusal.1916s00002.1 33187807 Ribosomal protein L36e [Interproscan]. 0.01 OrthoFinder
EOD30407 No alias Ribosomal protein L36e [Interproscan]. 0.06 OrthoFinder
OT_02G00860.1 No alias Ribosomal protein L36e [Interproscan]. 0.02 OrthoFinder
PTI_04G00610.1 No alias Ribosomal protein L36e [Interproscan]. 0.02 OrthoFinder
Sro327_g118470.1 Contig839.g9255 60S ribosomal protein L36 0.05 OrthoFinder
TP04G05720.1 No alias Ribosomal protein L36e [Interproscan]. 0.06 OrthoFinder
Vocar.0031s0112.1 32890137 Ribosomal protein L36e [Interproscan]. 0.03 OrthoFinder
XM_002507094.1 MICPUN_114038, 114038 60S ribosomal protein L36 (RPL36) 0.04 OrthoFinder
XM_003056471.1 MicpuC2_31782, 31782 60S ribosomal protein L36 (RPL36) 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499503.1_8456 KAA8499503 60S ribosomal protein L36-1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000509 Ribosomal_L36e 12 109
No external refs found!