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  5. Cpa|evm.model.tig00001668.4

Cpa|evm.model.tig00001668.4 (tig00001668_g9550.t1)


Aliases : tig00001668_g9550.t1

Description : Protein BOBBER 1 OS=Arabidopsis thaliana


Gene families : OG_01_0001993 (OrthoFinder) Phylogenetic Tree(s): OG0001993_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001668.4
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
EOD41734 No alias CS domain; NudC N-terminal domain [Interproscan]. 0.02 OrthoFinder
PTI_13G02450.1 No alias CS domain; NudC N-terminal domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR007052 CS_dom 20 93
No external refs found!