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  5. SymbC1.scaffold12680.1

SymbC1.scaffold12680.1 (12680.1)


Aliases : 12680.1

Description : Isochorismatase-like [Interproscan].


Gene families : OG_01_0000451 (OrthoFinder) Phylogenetic Tree(s): OG0000451_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold12680.1
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000008.1_cds_KAA8492917.1_2653 KAA8492917 Putative isochorismatase family protein YaaI 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
MF GO:0008914 leucyltransferase activity IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0018298 protein-chromophore linkage IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0030076 light-harvesting complex IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000868 Isochorismatase-like 54 249
No external refs found!