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  5. SymbC1.scaffold1247.1

SymbC1.scaffold1247.1 (1247.1)


Aliases : 1247.1

Description : DEAD/DEAH box helicase domain; Domain of unknown function DUF1605; Helicase-associated domain; Helicase, C-terminal [Interproscan].


Gene families : OG_01_0000129 (OrthoFinder) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1247.1
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
EOD09487 No alias Helicase, C-terminal; Helicase-associated domain; Domain... 0.01 OrthoFinder
XM_002503731.1 MICPUN_59722, 59722 Helicase, C-terminal; Helicase-associated domain; Domain... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 428 555
IPR007502 Helicase-assoc_dom 619 695
IPR011545 DEAD/DEAH_box_helicase_dom 177 329
IPR011709 DUF1605 770 845
No external refs found!