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  5. SymbC1.scaffold1230.5

SymbC1.scaffold1230.5 (1230.5)


Aliases : 1230.5

Description : Short-chain dehydrogenase/reductase SDR [Interproscan].


Gene families : OG_01_0000065 (OrthoFinder) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1230.5
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cre02.g113652 30785599 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.01 OrthoFinder
OT_02G04010.1 No alias Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.01 OrthoFinder
PTI_19G01610.1 No alias Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
InterPro domains Description Start Stop
IPR002347 SDR_fam 107 249
No external refs found!