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  5. SymbC1.scaffold1180.4

SymbC1.scaffold1180.4 (1180.4)


Aliases : 1180.4

Description : Hypothetical protein


Gene families : OG_01_0000024 (OrthoFinder) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1180.4
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000227.15 tig00000227_g19809.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00021042.12 tig00021042_g17603.t1 No description available 0.04 OrthoFinder
Cz04g20100.t1 No alias BTB/POZ domain; NHL repeat [Interproscan]. 0.01 OrthoFinder
EOD11514 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
EOD20790 No alias SMP-30/Gluconolactonase/LRE-like region; BTB/POZ domain... 0.03 OrthoFinder
Transcript_contig_55167 55167 NHL repeat; Thioredoxin-like fold [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!