SymbC1.scaffold11564.2 (11564.2)

Aliases : 11564.2

Description : Zinc finger, GRF-type [Interproscan].

Gene families : OG_01_0001243 (OrthoFinder) Phylogenetic Tree(s): OG0001243_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold11564.2
Cluster	HCCA: Cluster_89

Target	Alias	Description	ECC score	Gene Family Method
SymbC1.scaffold11564.1	11564.1	Hypothetical protein	0.03	OrthoFinder
SymbC1.scaffold13709.1	13709.1	Reverse transcriptase, RNA-dependent DNA polymerase...	0.04	OrthoFinder
SymbC1.scaffold588.6	588.6	Hypothetical protein	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	Enrichment
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Enrichment
BP	GO:0015074	DNA integration	IEP	Enrichment
MF	GO:0030247	polysaccharide binding	IEP	Enrichment
MF	GO:2001070	starch binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR010666	Znf_GRF	133	175

External Links

No external refs found!