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  5. SymbC1.scaffold11564.1

SymbC1.scaffold11564.1 (11564.1)


Aliases : 11564.1

Description : Hypothetical protein


Gene families : OG_01_0001243 (OrthoFinder) Phylogenetic Tree(s): OG0001243_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold11564.1
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1097.4 1097.4 Zinc finger, CCHC-type; Reverse transcriptase,... 0.04 OrthoFinder
SymbC1.scaffold11564.2 11564.2 Zinc finger, GRF-type [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold253.5 253.5 Zinc finger, GRF-type [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold3556.2 3556.2 Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
SymbC1.scaffold588.6 588.6 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold5890.2 5890.2 Hypothetical protein 0.02 OrthoFinder
SymbC1.scaffold947.6 947.6 Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0008360 regulation of cell shape IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
CC GO:0009427 bacterial-type flagellum basal body, distal rod, L ring IEP Enrichment
CC GO:0009428 bacterial-type flagellum basal body, distal rod, P ring IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
BP GO:0022604 regulation of cell morphogenesis IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!