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  5. Cpa|evm.model.tig00001545.15

Cpa|evm.model.tig00001545.15 (tig00001545_g9345.t1)


Aliases : tig00001545_g9345.t1

Description : Alpha-mannosidase I MNS4 OS=Arabidopsis thaliana


Gene families : OG_01_0000216 (OrthoFinder) Phylogenetic Tree(s): OG0000216_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001545.15
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_62541 62541 Glycoside hydrolase family 47 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
InterPro domains Description Start Stop
IPR001382 Glyco_hydro_47 43 173
IPR001382 Glyco_hydro_47 237 413
No external refs found!