Aliases : tig00001542_g9330.t1
Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TATA box-binding protein (TBP) regulation.NC2 regulator complex.beta component
Gene families : OG_01_0000661 (OrthoFinder) Phylogenetic Tree(s): OG0000661_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cpa|evm.model.tig00001542.23 | |
Cluster | HCCA: Cluster_42 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre17.g739450 | 30782065, DRT1 | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | OrthoFinder | |
Cz10g24060.t1 | No alias | Transcription factor CBF/NF-Y/archaeal histone domain... | 0.02 | OrthoFinder | |
Sro73_g040390.1 | Contig3929.g30140 | Transcription factor Y subunit B | 0.01 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000123 | histone acetyltransferase complex | IEP | Enrichment |
CC | GO:0000124 | SAGA complex | IEP | Enrichment |
MF | GO:0003712 | transcription coregulator activity | IEP | Enrichment |
MF | GO:0003713 | transcription coactivator activity | IEP | Enrichment |
CC | GO:0005643 | nuclear pore | IEP | Enrichment |
CC | GO:0005929 | cilium | IEP | Enrichment |
BP | GO:0006405 | RNA export from nucleus | IEP | Enrichment |
BP | GO:0006406 | mRNA export from nucleus | IEP | Enrichment |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | Enrichment |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | Enrichment |
CC | GO:0031248 | protein acetyltransferase complex | IEP | Enrichment |
CC | GO:0031514 | motile cilium | IEP | Enrichment |
CC | GO:0042995 | cell projection | IEP | Enrichment |
CC | GO:0043226 | organelle | IEP | Enrichment |
CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
BP | GO:0050657 | nucleic acid transport | IEP | Enrichment |
BP | GO:0050658 | RNA transport | IEP | Enrichment |
BP | GO:0051028 | mRNA transport | IEP | Enrichment |
BP | GO:0051168 | nuclear export | IEP | Enrichment |
BP | GO:0051169 | nuclear transport | IEP | Enrichment |
BP | GO:0051236 | establishment of RNA localization | IEP | Enrichment |
CC | GO:0070461 | SAGA-type complex | IEP | Enrichment |
CC | GO:0120025 | plasma membrane bounded cell projection | IEP | Enrichment |
CC | GO:0140535 | intracellular protein-containing complex | IEP | Enrichment |
CC | GO:1902493 | acetyltransferase complex | IEP | Enrichment |
CC | GO:1905368 | peptidase complex | IEP | Enrichment |
CC | GO:1990234 | transferase complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003958 | CBFA_NFYB_domain | 12 | 76 |
No external refs found! |