SymbC1.scaffold113.72 (113.72)

Aliases : 113.72

Description : MalK, OB fold domain; ABC transporter-like; Bacterial extracellular solute-binding protein; ABC transporter type 1, transmembrane domain MetI-like [Interproscan].

Gene families : OG_01_0000256 (OrthoFinder) Phylogenetic Tree(s): OG0000256_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold113.72
Cluster	HCCA: Cluster_106

Target	Alias	Description	ECC score	Gene Family Method	Actions
SymbC1.scaffold25.145	25.145	Bacterial extracellular solute-binding protein; ABC...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004807	triose-phosphate isomerase activity	IEP	Enrichment
MF	GO:0008320	protein transmembrane transporter activity	IEP	Enrichment
BP	GO:0009306	protein secretion	IEP	Enrichment
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Enrichment
MF	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity	IEP	Enrichment
BP	GO:0015833	peptide transport	IEP	Enrichment
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Enrichment
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Enrichment
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	Enrichment
BP	GO:0032940	secretion by cell	IEP	Enrichment
BP	GO:0035592	establishment of protein localization to extracellular region	IEP	Enrichment
BP	GO:0042886	amide transport	IEP	Enrichment
BP	GO:0046903	secretion	IEP	Enrichment
MF	GO:0051287	NAD binding	IEP	Enrichment
BP	GO:0071692	protein localization to extracellular region	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment
BP	GO:0071705	nitrogen compound transport	IEP	Enrichment
MF	GO:0140318	protein transporter activity	IEP	Enrichment
BP	GO:0140352	export from cell	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR006059	SBP	64	365
IPR040582	OB_MalK	1249	1302
IPR000515	MetI-like	572	772
IPR000515	MetI-like	858	998
IPR003439	ABC_transporter-like_ATP-bd	1041	1182

External Links

No external refs found!

SymbC1.scaffold113.72 (113.72)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation