SymbC1.scaffold11278.1 (11278.1)

Aliases : 11278.1

Description : Ribosomal L28e/Mak16 [Interproscan].

Gene families : OG_01_0004517 (OrthoFinder) Phylogenetic Tree(s): OG0004517_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold11278.1
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020710.93	tig00020710_g13357.t1	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder
Cre11.g467578	30775702	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder
EOD16362	No alias	Ribosomal L28e/Mak16 [Interproscan].	0.01	OrthoFinder
PTI_03G02910.1	No alias	Ribosomal L28e/Mak16 [Interproscan].	0.02	OrthoFinder
Sro827_g207890.1	Contig2896.g23094	60S ribosomal protein L28	0.02	OrthoFinder
TP01G10070.1	No alias	Ribosomal L28e/Mak16 [Interproscan].	0.02	OrthoFinder
XM_002509130.1	MICPUN_52633, 52633	Ribosomal L28e/Mak16 [Interproscan].	0.02	OrthoFinder
lcl\|VRMN01000011.1_cds_KAA8491874.1_4882	KAA8491874	60S ribosomal protein L28	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004843	thiol-dependent deubiquitinase	IEP	Enrichment
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Enrichment
MF	GO:0008242	omega peptidase activity	IEP	Enrichment
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Enrichment
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Enrichment
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Enrichment
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Enrichment
MF	GO:0101005	deubiquitinase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR029004	L28e/Mak16	6	126

External Links

No external refs found!