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  5. SymbC1.scaffold1125.2

SymbC1.scaffold1125.2 (1125.2)


Aliases : 1125.2

Description : Hypothetical protein


Gene families : OG_01_0001414 (OrthoFinder) Phylogenetic Tree(s): OG0001414_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1125.2
Cluster HCCA: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1965.7 1965.7 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold2594.2 2594.2 Hypothetical protein 0.07 OrthoFinder
SymbC1.scaffold2715.7 2715.7 Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
SymbC1.scaffold534.4 534.4 Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
SymbC1.scaffold5349.5 5349.5 Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
SymbC1.scaffold6763.3 6763.3 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold7191.4 7191.4 Hypothetical protein 0.08 OrthoFinder
SymbC1.scaffold7480.1 7480.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold9495.1 9495.1 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment

No InterPro domains available for this sequence

No external refs found!