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  5. SymbC1.scaffold1116.4

SymbC1.scaffold1116.4 (1116.4)


Aliases : 1116.4

Description : Guanylate-binding protein/Atlastin, C-terminal; Guanylate-binding protein, N-terminal [Interproscan].


Gene families : OG_01_0000852 (OrthoFinder) Phylogenetic Tree(s): OG0000852_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1116.4
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000955.23 tig00000955_g5798.t1 No description available 0.01 OrthoFinder
Dusal.0386s00019.1 33191480 Guanylate-binding protein, N-terminal [Interproscan]. 0.03 OrthoFinder
Vocar.0018s0070.1 32898655 Guanylate-binding protein, N-terminal; Guanylate-binding... 0.01 OrthoFinder
lcl|BLLF01000127.1_cds_GFH07956.1_2433 HaLaN_02842, GFH07956 GBP-domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR015894 Guanylate-bd_N 24 278
IPR003191 Guanylate-bd/ATL_C 282 590
No external refs found!