SymbC1.scaffold11124.1 (11124.1)

Aliases : 11124.1

Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase [Interproscan].

Gene families : OG_01_0004642 (OrthoFinder) Phylogenetic Tree(s): OG0004642_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold11124.1
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
SymbC1.scaffold1244.4	1244.4	Hypothetical protein	0.06	OrthoFinder
SymbC1.scaffold12818.1	12818.1	Hypothetical protein	0.03	OrthoFinder
SymbC1.scaffold14719.2	14719.2	Hypothetical protein	0.05	OrthoFinder
SymbC1.scaffold38558.1	38558.1	Hypothetical protein	0.1	OrthoFinder
SymbC1.scaffold9384.1	9384.1	Hypothetical protein	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006541	glutamine metabolic process	IEP	Enrichment
BP	GO:0006542	glutamine biosynthetic process	IEP	Enrichment
BP	GO:0008360	regulation of cell shape	IEP	Enrichment
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Enrichment
CC	GO:0009427	bacterial-type flagellum basal body, distal rod, L ring	IEP	Enrichment
CC	GO:0009428	bacterial-type flagellum basal body, distal rod, P ring	IEP	Enrichment
MF	GO:0015002	obsolete heme-copper terminal oxidase activity	IEP	Enrichment
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Enrichment
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	Enrichment
BP	GO:0022604	regulation of cell morphogenesis	IEP	Enrichment
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Enrichment
BP	GO:0042254	ribosome biogenesis	IEP	Enrichment
BP	GO:0044085	cellular component biogenesis	IEP	Enrichment
BP	GO:0050793	regulation of developmental process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	313	487

External Links

No external refs found!