Aliases : 109.47
Description : Bacterial extracellular solute-binding protein [Interproscan].
Gene families : OG_01_0000256 (OrthoFinder) Phylogenetic Tree(s): OG0000256_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: SymbC1.scaffold109.47 | |
Cluster | HCCA: Cluster_81 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
SymbC1.scaffold160.52 | 160.52 | Cupin 2, conserved barrel; ABC transporter-like;... | 0.04 | OrthoFinder | |
SymbC1.scaffold217.29 | 217.29 | ABC-2 family transporter protein; HlyD family secretion... | 0.05 | OrthoFinder | |
SymbC1.scaffold25.189 | 25.189 | Bacterial extracellular solute-binding protein; ABC... | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | Enrichment |
MF | GO:0003674 | molecular_function | IEP | Enrichment |
MF | GO:0003824 | catalytic activity | IEP | Enrichment |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
BP | GO:0006790 | sulfur compound metabolic process | IEP | Enrichment |
BP | GO:0016043 | cellular component organization | IEP | Enrichment |
MF | GO:0016209 | antioxidant activity | IEP | Enrichment |
BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Enrichment |
MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
MF | GO:0019842 | vitamin binding | IEP | Enrichment |
BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Enrichment |
BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
MF | GO:0043169 | cation binding | IEP | Enrichment |
MF | GO:0046872 | metal ion binding | IEP | Enrichment |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
MF | GO:1901681 | sulfur compound binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006059 | SBP | 49 | 346 |
No external refs found! |