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  5. SymbC1.scaffold109.30

SymbC1.scaffold109.30 (109.30)


Aliases : 109.30

Description : Peptidase M23; BPG-independent PGAM, N-terminal; Metalloenzyme [Interproscan].


Gene families : OG_01_0001933 (OrthoFinder) Phylogenetic Tree(s): OG0001933_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold109.30
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_89249 89249 BPG-independent PGAM, N-terminal; Metalloenzyme [Interproscan]. 0.02 OrthoFinder
XM_003058861.1 MicpuC2_26927, 26927 BPG-independent PGAM, N-terminal; Metalloenzyme [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004619 phosphoglycerate mutase activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006007 glucose catabolic process IEA Interproscan
MF GO:0030145 manganese ion binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR011258 BPG-indep_PGM_N 85 295
IPR016047 Peptidase_M23 777 872
IPR006124 Metalloenzyme 8 498
No external refs found!