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  5. Cpa|evm.model.tig00000113.44

Cpa|evm.model.tig00000113.44 (tig00000215_g18663.t1)


Aliases : tig00000215_g18663.t1

Description : Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase


Gene families : OG_01_0000505 (OrthoFinder) Phylogenetic Tree(s): OG0000505_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000113.44
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Cz15g12200.t1 No alias Histone deacetylase domain [Interproscan]. 0.02 OrthoFinder
Sro388_g132310.1 Contig4393.g33005 Probable histone deacetylase 1-B 0.02 OrthoFinder
Transcript_contig_55018 55018 Histone deacetylase domain [Interproscan]. 0.03 OrthoFinder
XM_003060106.1 MicpuC2_34341, 34341 Histone deacetylase 0.02 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44357.1_2087 PRW44357 Histone deacetylase 0.02 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33263.1_3567 PRW33263 Histone deacetylase 8-like 0.02 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493734.1_4496 KAA8493734 Histone deacetylase 1 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016571 histone methylation IEP Enrichment
BP GO:0018022 peptidyl-lysine methylation IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0034968 histone lysine methylation IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 157 295
No external refs found!