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  5. SymbC1.scaffold1086.4

SymbC1.scaffold1086.4 (1086.4)


Aliases : 1086.4

Description : Acyl transferase; Beta-ketoacyl synthase, N-terminal; Polyketide synthase, ketoreductase domain; Beta-ketoacyl synthase, C-terminal; Polyketide synthase, dehydratase domain [Interproscan].


Gene families : OG_01_0000078 (OrthoFinder) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1086.4
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
XM_003055886.1 MicpuC2_13786, 13786 Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl... 0.01 OrthoFinder
XM_003055887.1 MicpuC2_13794, 13794 Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl... 0.01 OrthoFinder
XM_003055889.1 MicpuC2_14392, 14392 Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl... 0.01 OrthoFinder
XM_003055890.1 MicpuC2_6771, 6771 Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl... 0.01 OrthoFinder
XM_003055891.1 MicpuC2_64230, 64230 Polyketide synthase, ketoreductase domain [Interproscan]. 0.01 OrthoFinder
XM_003055892.1 MicpuC2_13780, 13780 Beta-ketoacyl synthase, C-terminal [Interproscan]. 0.01 OrthoFinder
XM_003055894.1 MicpuC2_14310, 14310 Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl... 0.02 OrthoFinder
XM_003055896.1 MicpuC2_7173, 7173 Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl... 0.02 OrthoFinder
XM_003055897.1 MicpuC2_13785, 13785 Beta-ketoacyl synthase, C-terminal [Interproscan]. 0.02 OrthoFinder
XM_003055898.1 MicpuC2_13836, 13836 Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl... 0.02 OrthoFinder
XM_003056284.1 MicpuC2_55217, 55217 Hypothetical protein (PKS2) 0.01 OrthoFinder
lcl|BLLF01000904.1_cds_GFH15811.1_10288 HaLaN_12116, GFH15811 Type I polyketide synthase 0.03 OrthoFinder
lcl|BLLF01001312.1_cds_GFH18522.1_12999 HaLaN_15343, GFH18522 Beta-ketoacyl synthase, N-terminal [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR014030 Ketoacyl_synth_N 3 134
IPR020807 PKS_dehydratase 549 852
IPR014031 Ketoacyl_synth_C 259 293
IPR014031 Ketoacyl_synth_C 144 225
IPR013968 PKS_KR 1100 1263
IPR014043 Acyl_transferase 358 464
No external refs found!