SymbC1.scaffold10555.1 (10555.1)

Aliases : 10555.1

Description : Zinc finger, PARP-type [Interproscan].

Gene families : OG_01_0059456 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold10555.1
Cluster	HCCA: Cluster_13

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation	IEP	Enrichment
MF	GO:0003972	RNA ligase (ATP) activity	IEP	Enrichment
MF	GO:0004649	poly(ADP-ribose) glycohydrolase activity	IEP	Enrichment
BP	GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	IEP	Enrichment
BP	GO:0008033	tRNA processing	IEP	Enrichment
BP	GO:0008380	RNA splicing	IEP	Enrichment
MF	GO:0008452	RNA ligase activity	IEP	Enrichment
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	Enrichment
BP	GO:0034470	ncRNA processing	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001510	Znf_PARP	4	61

External Links

No external refs found!