1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00001486.9

Cpa|evm.model.tig00001486.9 (tig00001486_g8926.t1)


Aliases : tig00001486_g8926.t1

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS26 component


Gene families : OG_01_0002849 (OrthoFinder) Phylogenetic Tree(s): OG0002849_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001486.9
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
Cre16.g682300 30776938, RPS26 Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 OrthoFinder
Cz08g12070.t1 No alias Ribosomal protein S26e [Interproscan]. 0.11 OrthoFinder
Dusal.0032s00020.1 33186664 Ribosomal protein S26e [Interproscan]. 0.08 OrthoFinder
EOD22215 No alias Ribosomal protein S26e [Interproscan]. 0.04 OrthoFinder
OT_02G02540.1 No alias Ribosomal protein S26e [Interproscan]. 0.09 OrthoFinder
PTI_21G00830.1 No alias Ribosomal protein S26e [Interproscan]. 0.02 OrthoFinder
Sro1334_g263860.1 Contig785.g8790 40S ribosomal protein S26 0.18 OrthoFinder
SymbC1.scaffold913.4 913.4 Ribosomal protein S26e [Interproscan]. 0.04 OrthoFinder
Transcript_contig_79948 79948 Ribosomal protein S26e [Interproscan]. 0.02 OrthoFinder
Vocar.0018s0140.1 32898717 Ribosomal protein S26e [Interproscan]. 0.06 OrthoFinder
XM_002504425.1 MICPUN_61082, 61082 Ribosomal protein S26e [Interproscan]. 0.05 OrthoFinder
XM_003059864.1 MicpuC2_27736, 27736 Ribosomal protein S26e [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01001764.1_cds_GFH21111.1_15588 HaLaN_18351, GFH21111 40S ribosomal protein S26 0.1 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57833.1_8259 PRW57833 40S ribosomal S26 0.02 OrthoFinder
lcl|VRMN01000031.1_cds_KAA8490355.1_5745 KAA8490355 40S ribosomal protein S26-B 0.11 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000892 Ribosomal_S26e 35 140
No external refs found!