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  5. SymbC1.scaffold10192.1

SymbC1.scaffold10192.1 (10192.1)


Aliases : 10192.1

Description : EF-hand domain [Interproscan].


Gene families : OG_01_0000305 (OrthoFinder) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold10192.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1537.1 1537.1 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold1821.3 1821.3 EF-hand domain; Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold2693.4 2693.4 Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold2758.5 2758.5 Ion transport domain [Interproscan]. 0.11 OrthoFinder
SymbC1.scaffold2852.1 2852.1 Cyclic nucleotide-binding domain; Ion transport domain... 0.08 OrthoFinder
SymbC1.scaffold4039.1 4039.1 EF-hand domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold6224.1 6224.1 Hypothetical protein 0.08 OrthoFinder
SymbC1.scaffold702.10 702.10 Ion transport domain [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold702.8 702.8 Ion transport domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 141 160
No external refs found!