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  5. SymbC1.scaffold1015.3

SymbC1.scaffold1015.3 (1015.3)


Aliases : 1015.3

Description : Ribosomal protein L35A [Interproscan].


Gene families : OG_01_0003454 (OrthoFinder) Phylogenetic Tree(s): OG0003454_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1015.3
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020723.23 tig00020723_g13442.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder
Cre10.g459250 30790514, RPL35a Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder
EOD28237 No alias Ribosomal protein L35A [Interproscan]. 0.01 OrthoFinder
EOD40099 No alias 60S ribosomal protein L35A [Ensembl]. 0.01 OrthoFinder
OT_08G03250.1 No alias Ribosomal protein L35A [Interproscan]. 0.03 OrthoFinder
PTI_26G00860.1 No alias Ribosomal protein L35A [Interproscan]. 0.04 OrthoFinder
Sro60_g034780.1 Contig797.g8955 60S ribosomal protein L35a 0.04 OrthoFinder
TP10G03680.1 No alias Ribosomal protein L35A [Interproscan]. 0.02 OrthoFinder
Vocar.0020s0177.1 32886748 Ribosomal protein L35A [Interproscan]. 0.03 OrthoFinder
XM_002508291.1 MICPUN_108826, 108826 Ribosomal protein L35A [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57926.1_8416 PRW57926 60S ribosomal L35a-3 0.03 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495080.1_3610 KAA8495080 60S ribosomal protein L35a 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
InterPro domains Description Start Stop
IPR001780 Ribosomal_L35A 20 114
No external refs found!