SymbC1.scaffold1003.5 (1003.5)

Aliases : 1003.5

Description : Pyruvate phosphate dikinase, AMP/ATP-binding; Alpha-amylase, C-terminal beta-sheet; Glycosyl hydrolase, family 13, catalytic domain; Shikimate kinase/gluconokinase; 3-dehydroquinate dehydratase type I; Carbohydrate binding module family 20 [Interproscan].

Gene families : OG_01_0000963 (OrthoFinder) Phylogenetic Tree(s): OG0000963_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: SymbC1.scaffold1003.5

Target Alias Description ECC score Gene Family Method Actions
Cre08.g384750 30773614 Carbohydrate metabolism.starch... 0.01 OrthoFinder
Dusal.0430s00013.1 33200656 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0003855 3-dehydroquinate dehydratase activity IEA Interproscan
MF GO:0004556 alpha-amylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016301 kinase activity IEA Interproscan
BP GO:0016310 phosphorylation IEA Interproscan
MF GO:2001070 starch binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR002192 PPDK_AMP/ATP-bd 1194 1500
IPR031322 Shikimate/glucono_kinase 1547 1691
IPR006047 Glyco_hydro_13_cat_dom 50 325
IPR002044 CBM_fam20 510 586
IPR012850 A-amylase_bs_C 380 437
IPR001381 DHquinase_I 1725 1942
No external refs found!