1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold1.927

SymbC1.scaffold1.927 (1.927)


Aliases : 1.927

Description : Domain of unknown function DUF1549; Protein of unknown function DUF1501; Cytochrome C, Planctomycete-type; Domain of unknown function DUF1553 [Interproscan].


Gene families : OG_01_0000096 (OrthoFinder) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1.927
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1.1281 1.1281 Protein of unknown function DUF1501 [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold1.2037 1.2037 Protein of unknown function DUF1501; Domain of unknown... 0.03 OrthoFinder
SymbC1.scaffold1.2384 1.2384 Protein of unknown function DUF1501; Transposase... 0.04 OrthoFinder
SymbC1.scaffold1.456 1.456 Protein of unknown function DUF1501; Domain of unknown... 0.04 OrthoFinder
SymbC1.scaffold1.876 1.876 Domain of unknown function DUF1553;... 0.04 OrthoFinder
SymbC1.scaffold1.910 1.910 Domain of unknown function DUF1549; Protein of unknown... 0.03 OrthoFinder
SymbC1.scaffold14729.2 14729.2 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold15046.2 15046.2 Domain of unknown function DUF1553; RNA polymerase... 0.04 OrthoFinder
SymbC1.scaffold16.366 16.366 Domain of unknown function DUF1549; Domain of unknown... 0.04 OrthoFinder
SymbC1.scaffold17.122 17.122 Domain of unknown function DUF1549; Domain of unknown... 0.04 OrthoFinder
SymbC1.scaffold18.235 18.235 Domain of unknown function DUF1549; Protein of unknown... 0.04 OrthoFinder
SymbC1.scaffold2.1175 2.1175 Alpha/beta hydrolase fold-3; Protein of unknown function... 0.04 OrthoFinder
SymbC1.scaffold2.1347 2.1347 Domain of unknown function DUF1553; Rad50/SbcC-type AAA... 0.03 OrthoFinder
SymbC1.scaffold2.1872 2.1872 Domain of unknown function DUF1549; Protein of unknown... 0.03 OrthoFinder
SymbC1.scaffold21255.1 21255.1 Domain of unknown function DUF1549; Cytochrome C,... 0.04 OrthoFinder
SymbC1.scaffold22185.2 22185.2 Protein of unknown function DUF1501 [Interproscan]. 0.06 OrthoFinder
SymbC1.scaffold22336.1 22336.1 Domain of unknown function DUF1549; Domain of unknown... 0.03 OrthoFinder
SymbC1.scaffold22759.1 22759.1 Domain of unknown function DUF1549; Protein of unknown... 0.04 OrthoFinder
SymbC1.scaffold27044.1 27044.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold27890.1 27890.1 Domain of unknown function DUF1553 [Interproscan]. 0.06 OrthoFinder
SymbC1.scaffold29887.1 29887.1 Domain of unknown function DUF1553 [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold30332.1 30332.1 Protein of unknown function DUF1501 [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold32.53 32.53 Protein of unknown function DUF1501; Domain of unknown... 0.05 OrthoFinder
SymbC1.scaffold37281.1 37281.1 Domain of unknown function DUF1549; Cytochrome C,... 0.04 OrthoFinder
SymbC1.scaffold38781.1 38781.1 Protein of unknown function DUF1501 [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold9.269 9.269 Protein of unknown function DUF1501; Domain of unknown... 0.04 OrthoFinder
SymbC1.scaffold9.414 9.414 Protein of unknown function DUF1501; Alpha/beta... 0.04 OrthoFinder
SymbC1.scaffold9.473 9.473 Protein of unknown function DUF1501; Domain of unknown... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004803 transposase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005615 extracellular space IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006313 transposition, DNA-mediated IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006730 one-carbon metabolic process IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0015159 polysaccharide transmembrane transporter activity IEP Enrichment
BP GO:0015774 polysaccharide transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Enrichment
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0032196 transposition IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Enrichment
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Enrichment
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR011444 DUF1549 182 390
IPR010869 DUF1501 1009 1420
IPR011429 Cyt_c_Planctomycete-type 55 113
IPR022655 DUF1553 698 948
No external refs found!