SymbC1.scaffold1.498 (1.498)

Aliases : 1.498

Description : TadE-like; Putative Flp pilus-assembly TadG-like, N-terminal; Type II/IV secretion system protein; AAA domain; Prepilin type IV endopeptidase, peptidase domain; Type II secretion system protein GspF domain [Interproscan].

Gene families : OG_01_0001714 (OrthoFinder) Phylogenetic Tree(s): OG0001714_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold1.498
Cluster	HCCA: Cluster_1

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004190	aspartic-type endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0070001	aspartic-type peptidase activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001482	T2SS/T4SS	2175	2450
IPR028087	Tad_N	1328	1371
IPR012495	TadE	241	283
IPR018076	T2SS_GspF_dom	2631	2754
IPR018076	T2SS_GspF_dom	2944	3071
IPR000045	Prepilin_IV_endopep_pep	113	199
IPR025669	AAA_dom	1795	1960

External Links

No external refs found!

SymbC1.scaffold1.498 (1.498)

Expression Profile

Co-expression Networks

Functional Annotation