SymbC1.scaffold1.267 (1.267)

Aliases : 1.267

Description : RapA2, cadherin-like domain; Dockerin type I repeat; Peptidase, C-terminal, archaeal/bacterial; Bacterial Ig domain [Interproscan].

Gene families : OG_01_0011425 (OrthoFinder) Phylogenetic Tree(s): OG0011425_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold1.267
Cluster	HCCA: Cluster_83

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004519	endonuclease activity	IEP	Enrichment
MF	GO:0004520	endodeoxyribonuclease activity	IEP	Enrichment
MF	GO:0004536	deoxyribonuclease activity	IEP	Enrichment
MF	GO:0004559	alpha-mannosidase activity	IEP	Enrichment
BP	GO:0005996	monosaccharide metabolic process	IEP	Enrichment
BP	GO:0006013	mannose metabolic process	IEP	Enrichment
BP	GO:0006310	DNA recombination	IEP	Enrichment
MF	GO:0008963	phospho-N-acetylmuramoyl-pentapeptide-transferase activity	IEP	Enrichment
MF	GO:0015923	mannosidase activity	IEP	Enrichment
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Enrichment
BP	GO:0019318	hexose metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007280	Peptidase_C_arc/bac	2536	2609
IPR040853	RapA2_cadherin-like	4502	4574
IPR040853	RapA2_cadherin-like	4052	4129
IPR040853	RapA2_cadherin-like	4385	4467
IPR002105	Dockerin_1_rpt	4952	5012

External Links

No external refs found!