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  5. SymbC1.scaffold1.2415

SymbC1.scaffold1.2415 (1.2415)


Aliases : 1.2415

Description : Macrocin-O-methyltransferase; PFTB repeat [Interproscan].


Gene families : OG_01_0000231 (OrthoFinder) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1.2415
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold16.193 16.193 von Willebrand factor, type A; Aerotolerance regulator,... 0.04 OrthoFinder
SymbC1.scaffold16.194 16.194 ATPase, AAA-3; Domain of unknown function DUF58;... 0.03 OrthoFinder
SymbC1.scaffold2.1303 2.1303 Aerotolerance regulator, N-terminal; von Willebrand... 0.03 OrthoFinder
SymbC1.scaffold2.1498 2.1498 Domain of unknown function DUF58; ATPase, AAA-3;... 0.04 OrthoFinder
SymbC1.scaffold2.2121 2.2121 PDZ domain; Glycosyl hydrolase family 98, putative... 0.03 OrthoFinder
SymbC1.scaffold22.285 22.285 Transposase IS3/IS911family; Integrase, catalytic core;... 0.05 OrthoFinder
SymbC1.scaffold37362.1 37362.1 ATPase, AAA-3 [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold4.72 4.72 Protein of unknown function (DUF4381; von Willebrand... 0.04 OrthoFinder
SymbC1.scaffold5.923 5.923 Domain of unknown function DUF58; Pyrrolo-quinoline... 0.04 OrthoFinder
SymbC1.scaffold9.400 9.400 ATPase, AAA-3; ChlI/MoxR, AAA lid domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold9.403 9.403 PFTB repeat; Glycosyl hydrolase family 98, putative... 0.05 OrthoFinder
SymbC1.scaffold9.407 9.407 Beta-lactamase enzyme family; Domain of unknown function... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity IEP Enrichment
MF GO:0003978 UDP-glucose 4-epimerase activity IEP Enrichment
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004803 transposase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006313 transposition, DNA-mediated IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008488 gamma-glutamyl carboxylase activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0008653 lipopolysaccharide metabolic process IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
MF GO:0008987 quinolinate synthetase A activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009103 lipopolysaccharide biosynthetic process IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
BP GO:0017187 peptidyl-glutamic acid carboxylation IEP Enrichment
BP GO:0018200 peptidyl-glutamic acid modification IEP Enrichment
BP GO:0018214 protein carboxylation IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
BP GO:0032196 transposition IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001330 PFTB_repeat 305 335
IPR001330 PFTB_repeat 154 170
IPR001330 PFTB_repeat 208 225
IPR008884 TylF_MeTrfase 394 533
No external refs found!