SymbC1.scaffold1.2368 (1.2368)

Aliases : 1.2368

Description : UvrA DNA-binding domain; Protein of unknown function DUF1501; Domain of unknown function DUF1553; YhcH/YjgK/YiaL family; ABC transporter-like; Concanavalin A-like lectin/glucanases superfamily; Domain of unknown function DUF1549; UvrA, interaction domain; Cytochrome C, Planctomycete-type [Interproscan].

Gene families : OG_01_0005500 (OrthoFinder) Phylogenetic Tree(s): OG0005500_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold1.2368
Cluster	HCCA: Cluster_120

Target	Alias	Description	ECC score	Gene Family Method	Actions
SymbC1.scaffold5.1148	5.1148	UvrA DNA-binding domain; Endonuclease I; ABC...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Enrichment
MF	GO:0004527	exonuclease activity	IEP	Enrichment
MF	GO:0004529	exodeoxyribonuclease activity	IEP	Enrichment
MF	GO:0004536	deoxyribonuclease activity	IEP	Enrichment
MF	GO:0004640	phosphoribosylanthranilate isomerase activity	IEP	Enrichment
MF	GO:0004834	tryptophan synthase activity	IEP	Enrichment
BP	GO:0006568	tryptophan metabolic process	IEP	Enrichment
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Enrichment
BP	GO:0006586	indolalkylamine metabolic process	IEP	Enrichment
BP	GO:0006873	cellular ion homeostasis	IEP	Enrichment
BP	GO:0006875	cellular metal ion homeostasis	IEP	Enrichment
BP	GO:0006879	cellular iron ion homeostasis	IEP	Enrichment
MF	GO:0008199	ferric iron binding	IEP	Enrichment
MF	GO:0008374	O-acyltransferase activity	IEP	Enrichment
MF	GO:0008855	exodeoxyribonuclease VII activity	IEP	Enrichment
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Enrichment
BP	GO:0009308	amine metabolic process	IEP	Enrichment
BP	GO:0015833	peptide transport	IEP	Enrichment
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Enrichment
MF	GO:0016746	acyltransferase activity	IEP	Enrichment
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Enrichment
MF	GO:0016796	exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Enrichment
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Enrichment
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Enrichment
MF	GO:0016895	exodeoxyribonuclease activity, producing 5'-phosphomonoesters	IEP	Enrichment
BP	GO:0019725	cellular homeostasis	IEP	Enrichment
BP	GO:0030003	cellular cation homeostasis	IEP	Enrichment
BP	GO:0042430	indole-containing compound metabolic process	IEP	Enrichment
BP	GO:0042886	amide transport	IEP	Enrichment
BP	GO:0044106	cellular amine metabolic process	IEP	Enrichment
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Enrichment
BP	GO:0046486	glycerolipid metabolic process	IEP	Enrichment
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Enrichment
BP	GO:0048878	chemical homeostasis	IEP	Enrichment
BP	GO:0050801	ion homeostasis	IEP	Enrichment
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Enrichment
BP	GO:0055065	metal ion homeostasis	IEP	Enrichment
BP	GO:0055072	iron ion homeostasis	IEP	Enrichment
BP	GO:0055076	transition metal ion homeostasis	IEP	Enrichment
BP	GO:0055080	cation homeostasis	IEP	Enrichment
BP	GO:0055082	cellular chemical homeostasis	IEP	Enrichment
BP	GO:0098771	inorganic ion homeostasis	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR010869	DUF1501	3352	3746
IPR041552	UvrA_DNA-bd	1299	1398
IPR041552	UvrA_DNA-bd	310	429
IPR003439	ABC_transporter-like_ATP-bd	1649	1885
IPR004375	YhcH/YjgK/YiaL	3748	3885
IPR022655	DUF1553	3035	3282
IPR041102	UvrA_inter	132	237
IPR041102	UvrA_inter	1134	1240
IPR011444	DUF1549	2509	2724
IPR011429	Cyt_c_Planctomycete-type	2384	2442
IPR003439	ABC_transporter-like_ATP-bd	662	898

External Links

No external refs found!

SymbC1.scaffold1.2368 (1.2368)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation