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  5. SymbC1.scaffold1.1535

SymbC1.scaffold1.1535 (1.1535)


Aliases : 1.1535

Description : Transglutaminase-like; Glucose/Sorbosone dehydrogenase [Interproscan].


Gene families : OG_01_0001851 (OrthoFinder) Phylogenetic Tree(s): OG0001851_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1.1535
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold4.1022 4.1022 Glucose/Sorbosone dehydrogenase [Interproscan]. 0.08 OrthoFinder
SymbC1.scaffold4.180 4.180 Glycosyl transferases group 1; Glucose/Sorbosone... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0008360 regulation of cell shape IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
CC GO:0009427 bacterial-type flagellum basal body, distal rod, L ring IEP Enrichment
CC GO:0009428 bacterial-type flagellum basal body, distal rod, P ring IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
BP GO:0022604 regulation of cell morphogenesis IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
InterPro domains Description Start Stop
IPR002931 Transglutaminase-like 1602 1702
IPR012938 Glc/Sorbosone_DH 233 584
No external refs found!