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  5. SymbC1.scaffold1.1462

SymbC1.scaffold1.1462 (1.1462)


Aliases : 1.1462

Description : Domain of unknown function DUF1549; Domain of unknown function DUF1553 [Interproscan].


Gene families : OG_01_0001322 (OrthoFinder) Phylogenetic Tree(s): OG0001322_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1.1462
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1.1031 1.1031 Domain of unknown function DUF1549; Domain of unknown... 0.04 OrthoFinder
SymbC1.scaffold14578.1 14578.1 Domain of unknown function DUF1549; Domain of unknown... 0.05 OrthoFinder
SymbC1.scaffold2.2083 2.2083 Cytochrome C, Planctomycete-type; WD40 repeat;... 0.04 OrthoFinder
SymbC1.scaffold2.651 2.651 Domain of unknown function DUF1553; Solute carrier... 0.03 OrthoFinder
SymbC1.scaffold27051.1 27051.1 Domain of unknown function DUF1549 [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold39125.1 39125.1 Domain of unknown function DUF1553 [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR011444 DUF1549 241 422
IPR022655 DUF1553 476 701
No external refs found!