SymbC1.scaffold1.1078 (1.1078)


Aliases : 1.1078

Description : Stress responsive alpha-beta barrel; Phosphoribosylglycinamide synthetase, N-terminal; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C-domain; Oxidoreductase, molybdopterin-binding domain [Interproscan].


Gene families : OG_01_0000706 (OrthoFinder) Phylogenetic Tree(s): OG0000706_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1.1078
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020961.35 tig00020961_g16656.t1 Nucleotide metabolism.purines.ribonucleotide (RN)... 0.02 OrthoFinder
Cz10g18110.t1 No alias Phosphoribosylglycinamide synthetase, ATP-grasp (A)... 0.01 OrthoFinder
SymbC1.scaffold2.1299 2.1299 Phosphoribosylglycinamide synthetase, C-domain;... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEA Interproscan
BP GO:0009113 purine nucleobase biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR020560 PRibGlycinamide_synth_C-dom 335 422
IPR020562 PRibGlycinamide_synth_N 1 100
IPR020561 PRibGlycinamid_synth_ATP-grasp 101 299
IPR000572 OxRdtase_Mopterin-bd_dom 1077 1238
IPR013097 Dabb 420 514
IPR013097 Dabb 526 613
No external refs found!