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  5. Cpa|evm.model.tig00001424.5

Cpa|evm.model.tig00001424.5 (tig00001424_g8704.t1)


Aliases : tig00001424_g8704.t1

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL10 component


Gene families : OG_01_0002492 (OrthoFinder) Phylogenetic Tree(s): OG0002492_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001424.5
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cz05g34280.t1 No alias Ribosomal protein L10e/L16 [Interproscan]. 0.11 OrthoFinder
Dusal.0318s00002.1 33185638 Ribosomal protein L10e/L16 [Interproscan]. 0.17 OrthoFinder
EOD11710 No alias Ribosomal protein L10e/L16 [Interproscan]. 0.06 OrthoFinder
OT_03G04340.1 No alias Ribosomal protein L10e/L16 [Interproscan]. 0.13 OrthoFinder
PTI_18G02960.1 No alias Ribosomal protein L10e/L16 [Interproscan]. 0.12 OrthoFinder
Transcript_contig_89977 89977 Ribosomal protein L10e/L16 [Interproscan]. 0.01 OrthoFinder
Vocar.0033s0178.1 32886367 Ribosomal protein L10e/L16 [Interproscan]. 0.04 OrthoFinder
XM_002507165.1 MICPUN_93045, 93045 Ribosomal protein L10e/L16 [Interproscan]. 0.22 OrthoFinder
XM_003054845.1 MicpuC2_24102, 24102 Ribosomal protein L10e/L16 [Interproscan]. 0.08 OrthoFinder
lcl|BLLF01000759.1_cds_GFH14724.1_9201 HaLaN_10834, GFH14724 Ribosomal protein L10 0.02 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20682.1_5260 PRW20682 60S ribosomal L10-3 0.15 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 29 139
No external refs found!