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Aliases : tig00001408_g8615.t1
Description : Actin-related protein 6 OS=Oryza sativa subsp. indica
Gene families : OG_01_0000106 (OrthoFinder) Phylogenetic Tree(s): OG0000106_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00001408.21 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| EOD34009 | No alias | Putative actin [Ensembl]. | 0.01 | OrthoFinder | |
| PTI_15G01980.1 | No alias | Actin family [Interproscan]. | 0.01 | OrthoFinder | |
| Transcript_contig_68036 | 68036 | Actin family [Interproscan]. | 0.01 | OrthoFinder | |
| XM_003058779.1 | MicpuC2_47282, 47282 | Actin superfamily | 0.02 | OrthoFinder | |
| XM_003060681.1 | MicpuC2_45725, 45725 | Actin superfamily | 0.03 | OrthoFinder | |
| lcl|BLLF01004621.1_cds_GFH29966.1_24443 | HaLaN_28726, GFH29966 | Actin | 0.02 | OrthoFinder | |
| lcl|LHPG02000003.1_cds_PRW59601.1_6691 | PRW59601 | Actin | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003924 | GTPase activity | IEP | Enrichment |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004379 | glycylpeptide N-tetradecanoyltransferase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005667 | transcription regulator complex | IEP | Enrichment |
| CC | GO:0005672 | transcription factor TFIIA complex | IEP | Enrichment |
| CC | GO:0005694 | chromosome | IEP | Enrichment |
| CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
| BP | GO:0006325 | chromatin organization | IEP | Enrichment |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Enrichment |
| BP | GO:0006413 | translational initiation | IEP | Enrichment |
| BP | GO:0006479 | protein methylation | IEP | Enrichment |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Enrichment |
| BP | GO:0008213 | protein alkylation | IEP | Enrichment |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Enrichment |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Enrichment |
| BP | GO:0016569 | covalent chromatin modification | IEP | Enrichment |
| BP | GO:0016570 | histone modification | IEP | Enrichment |
| BP | GO:0016571 | histone methylation | IEP | Enrichment |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Enrichment |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Enrichment |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Enrichment |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Enrichment |
| MF | GO:0019107 | myristoyltransferase activity | IEP | Enrichment |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| BP | GO:0034968 | histone lysine methylation | IEP | Enrichment |
| MF | GO:0042054 | histone methyltransferase activity | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0043412 | macromolecule modification | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | Enrichment |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
| No external refs found! |