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  5. Cpa|evm.model.tig00001408.10

Cpa|evm.model.tig00001408.10 (tig00001408_g8605.t1)


Aliases : tig00001408_g8605.t1

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.D-class RAB GTPase


Gene families : OG_01_0000215 (OrthoFinder) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001408.10
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cre12.g560150 30793394 Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder
Cre15.g641800 30783722 GTP-binding protein yptV2 OS=Volvox carteri 0.02 OrthoFinder
Dusal.0074s00014.1 33188476 Small GTPase [Interproscan]. 0.01 OrthoFinder
EOD34679 No alias Ras-related protein [Ensembl]. 0.07 OrthoFinder
OT_07G00770.1 No alias Small GTPase [Interproscan]. 0.03 OrthoFinder
Sro1231_g254630.1 Contig4451.g33439 Ras-related protein Rab 0.02 OrthoFinder
Sro2080_g313720.1 Contig2436.g19973 Ras-related protein Rab 0.01 OrthoFinder
TP03G05300.1 No alias Small GTPase [Interproscan]. 0.01 OrthoFinder
TP05G05610.1 No alias Small GTPase [Interproscan]. 0.01 OrthoFinder
TP22G00240.1 No alias Small GTPase [Interproscan]. 0.02 OrthoFinder
Vocar.0033s0060.1 32886318 Small GTPase [Interproscan]. 0.03 OrthoFinder
XM_003055674.1 MicpuC2_31102, 31102 Small GTPase [Interproscan]. 0.07 OrthoFinder
XM_003057331.1 MicpuC2_49521, 49521 Small GTPase [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000038.1_cds_GFH06421.1_898 HaLaN_01048, GFH06421 GTP-binding protein YPTC1 0.03 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60039.1_6259 PRW60039 Rab family GTPase 0.03 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58406.1_8120 PRW58406 Rab8-family small GTPase 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496791.1_520 KAA8496791 Ras-related protein ORAB-1 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005548 phospholipid transporter activity IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0010921 regulation of phosphatase activity IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
BP GO:0019220 regulation of phosphate metabolic process IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0019902 phosphatase binding IEP Enrichment
MF GO:0019903 protein phosphatase binding IEP Enrichment
BP GO:0031399 regulation of protein modification process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0035303 regulation of dephosphorylation IEP Enrichment
BP GO:0035304 regulation of protein dephosphorylation IEP Enrichment
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0051174 regulation of phosphorus metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0051336 regulation of hydrolase activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001806 Small_GTPase 10 170
No external refs found!