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Aliases : tig00001388_g8574.t1
Description : Caltractin OS=Scherffelia dubia
Gene families : OG_01_0000037 (OrthoFinder) Phylogenetic Tree(s): OG0000037_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00001388.4 | |
| Cluster | HCCA: Cluster_81 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre03.g178150 | 30788235, CAM1 | Calmodulin OS=Chlamydomonas reinhardtii | 0.05 | OrthoFinder | |
| Cre03.g178350 | 30787233, FAP272 | Calmodulin OS=Chlamydomonas reinhardtii | 0.02 | OrthoFinder | |
| Cz01g28170.t1 | No alias | EF-hand domain [Interproscan]. | 0.05 | OrthoFinder | |
| Cz14g12250.t1 | No alias | EF-hand domain pair; EF-hand domain [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0080s00002.1 | 33203946 | EF-hand domain [Interproscan]. | 0.05 | OrthoFinder | |
| Dusal.0281s00002.1 | 33190362 | EF-hand domain [Interproscan]. | 0.05 | OrthoFinder | |
| EOD09660 | No alias | Centrin [Ensembl]. | 0.01 | OrthoFinder | |
| EOD20105 | No alias | Centrin-like protein [Ensembl]. | 0.01 | OrthoFinder | |
| Sro426_g140290.1 | Contig1720.g15374 | Putative calmodulin-like protein | 0.02 | OrthoFinder | |
| SymbC1.scaffold2133.1 | 2133.1 | EF-hand domain; EF-hand domain pair [Interproscan]. | 0.01 | OrthoFinder | |
| SymbC1.scaffold6405.5 | 6405.5 | EF-hand domain [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_57615 | 57615 | EF-hand domain [Interproscan]. | 0.01 | OrthoFinder | |
| Transcript_contig_59375 | 59375 | EF-hand domain pair; EF-hand domain [Interproscan]. | 0.01 | OrthoFinder | |
| Vocar.0012s0203.1 | 32894916 | EF-hand domain [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0019s0206.1 | 32892735 | EF-hand domain [Interproscan]. | 0.01 | OrthoFinder | |
| XM_002500976.1 | MICPUN_90289, 90289 | Caltractin | 0.03 | OrthoFinder | |
| XM_003055480.1 | MicpuC2_11510, 11510 | EF-hand domain [Interproscan]. | 0.01 | OrthoFinder | |
| XM_003056806.1 | MicpuC2_49514, 49514 | Caltractin | 0.03 | OrthoFinder | |
| lcl|BLLF01000233.1_cds_GFH09419.1_3896 | HaLaN_04551, GFH09419 | EF-hand domain [Interproscan]. | 0.01 | OrthoFinder | |
| lcl|LHPG02000024.1_cds_PRW20359.1_5525 | PRW20359 | Centrin | 0.03 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8497936.1_6889 | KAA8497936 | Calmodulin | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000278 | mitotic cell cycle | IEP | Enrichment |
| CC | GO:0000775 | chromosome, centromeric region | IEP | Enrichment |
| CC | GO:0000776 | kinetochore | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003924 | GTPase activity | IEP | Enrichment |
| MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| CC | GO:0005694 | chromosome | IEP | Enrichment |
| CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | Enrichment |
| CC | GO:0005815 | microtubule organizing center | IEP | Enrichment |
| BP | GO:0006270 | DNA replication initiation | IEP | Enrichment |
| BP | GO:0006275 | regulation of DNA replication | IEP | Enrichment |
| BP | GO:0006605 | protein targeting | IEP | Enrichment |
| BP | GO:0006612 | protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0007049 | cell cycle | IEP | Enrichment |
| BP | GO:0007059 | chromosome segregation | IEP | Enrichment |
| BP | GO:0008104 | protein localization | IEP | Enrichment |
| MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
| BP | GO:0008380 | RNA splicing | IEP | Enrichment |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
| BP | GO:0031144 | proteasome localization | IEP | Enrichment |
| BP | GO:0031503 | protein-containing complex localization | IEP | Enrichment |
| BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
| BP | GO:0033365 | protein localization to organelle | IEP | Enrichment |
| BP | GO:0034613 | cellular protein localization | IEP | Enrichment |
| BP | GO:0034629 | cellular protein-containing complex localization | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0045047 | protein targeting to ER | IEP | Enrichment |
| CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051668 | localization within membrane | IEP | Enrichment |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Enrichment |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Enrichment |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
| CC | GO:0098687 | chromosomal region | IEP | Enrichment |
| CC | GO:0099080 | supramolecular complex | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002048 | EF_hand_dom | 40 | 101 |
| No external refs found! |