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  5. Cpa|evm.model.tig00001384.5

Cpa|evm.model.tig00001384.5 (tig00001384_g8554.t1)


Aliases : tig00001384_g8554.t1

Description : Putative serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. indica


Gene families : OG_01_0000205 (OrthoFinder) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001384.5
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Cre12.g494900 30792295 Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder
Dusal.0890s00003.1 33185260 Calcineurin-like phosphoesterase domain, ApaH type... 0.02 OrthoFinder
EOD37367 No alias Calcineurin-like phosphoesterase domain, ApaH type... 0.03 OrthoFinder
Transcript_contig_58134 58134 Calcineurin-like phosphoesterase domain, ApaH type... 0.01 OrthoFinder
Transcript_contig_61240 61240 Calcineurin-like phosphoesterase domain, ApaH type... 0.03 OrthoFinder
Vocar.0013s0113.1 32896491 Calcineurin-like phosphoesterase domain, ApaH type... 0.01 OrthoFinder
Vocar.0030s0066.1 32894570 Calcineurin-like phosphoesterase domain, ApaH type... 0.04 OrthoFinder
XM_003055506.1 MicpuC2_37960, 37960 Calcineurin-like phosphoesterase domain, ApaH type... 0.01 OrthoFinder
XM_003059278.1 MicpuC2_18067, 18067 Calcineurin-like phosphoesterase domain, ApaH type... 0.03 OrthoFinder
lcl|BLLF01002879.1_cds_GFH25656.1_20133 HaLaN_23655, GFH25656 Serine/threonine-protein phosphatase 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60266.1_4301 PRW60266 Serine threonine-phosphatase 2A catalytic subunit beta isoform 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005672 transcription factor TFIIA complex IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR004843 Calcineurin-like_PHP_ApaH 51 223
No external refs found!