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  5. Cpa|evm.model.tig00001376.28

Cpa|evm.model.tig00001376.28 (tig00001376_g8548.t1)


Aliases : tig00001376_g8548.t1

Description : Cellular respiration.tricarboxylic acid cycle.succinyl-CoA ligase dimer.beta subunit


Gene families : OG_01_0001703 (OrthoFinder) Phylogenetic Tree(s): OG0001703_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001376.28
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
Cre17.g703700 30781597, SCL2 Cellular respiration.tricarboxylic acid... 0.02 OrthoFinder
EOD16272 No alias Succinyl-coa ligase [Ensembl]. 0.02 OrthoFinder
Sro1996_g310050.1 Contig3556.g27466 Ligase [GDP-forming] subunit beta, mitochondrial 0.04 OrthoFinder
SymbC1.scaffold109.77 109.77 Lactate/malate dehydrogenase, C-terminal; Lactate/malate... 0.03 OrthoFinder
TP01G09560.1 No alias ATP-grasp fold, succinyl-CoA synthetase-type;... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
InterPro domains Description Start Stop
IPR013650 ATP-grasp_succ-CoA_synth-type 48 232
No external refs found!