1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00001366.11

Cpa|evm.model.tig00001366.11 (tig00001366_g8385.t1)


Aliases : tig00001366_g8385.t1

Description : Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana


Gene families : OG_01_0000492 (OrthoFinder) Phylogenetic Tree(s): OG0000492_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001366.11
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
Dusal.0097s00017.1 33203700 Ubiquitin carboxyl-terminal hydrolase, C-terminal;... 0.02 OrthoFinder
EOD33970 No alias MATH/TRAF domain; Ubiquitin carboxyl-terminal hydrolase... 0.01 OrthoFinder
OT_02G02970.1 No alias Ubiquitin carboxyl-terminal hydrolase, C-terminal;... 0.01 OrthoFinder
Transcript_contig_90319 90319 Hypothetical protein 0.01 OrthoFinder
Vocar.0001s0874.1 32884682 Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.01 OrthoFinder
XM_002504315.1 MICPUN_61497, 61497 MATH/TRAF domain; RING/Ubox like zinc-binding domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 12 130
IPR001394 Peptidase_C19_UCH 352 491
IPR024729 USP7_ICP0-binding_dom 657 716
No external refs found!