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  5. Cpa|evm.model.tig00001339.22

Cpa|evm.model.tig00001339.22 (tig00001339_g8278.t1)


Aliases : tig00001339_g8278.t1

Description : RNA processing.RNA quality control Exon Junction complex (EJC).core components.eIF4A3 helicase component


Gene families : OG_01_0000727 (OrthoFinder) Phylogenetic Tree(s): OG0000727_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001339.22
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold4316.1 4316.1 DEAD/DEAH box helicase domain; Helicase, C-terminal; WW... 0.03 OrthoFinder
Transcript_contig_54730 54730 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
XM_003055217.1 MicpuC2_31183, 31183 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 245 353
IPR011545 DEAD/DEAH_box_helicase_dom 54 203
No external refs found!