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  5. Cpa|evm.model.tig00001339.20

Cpa|evm.model.tig00001339.20 (tig00001339_g8275.t1)


Aliases : tig00001339_g8275.t1

Description : Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001339.20
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
PTI_12G00160.1 No alias Regulator of chromosome condensation (RCC1) repeat;... 0.01 OrthoFinder
Transcript_contig_58480 58480 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001514 selenocysteine incorporation IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006013 mannose metabolic process IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006451 translational readthrough IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0017025 TBP-class protein binding IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
MF GO:0140296 general transcription initiation factor binding IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 112 161
IPR000408 Reg_chr_condens 222 273
IPR000408 Reg_chr_condens 276 329
IPR000408 Reg_chr_condens 51 98
IPR000408 Reg_chr_condens 164 209
No external refs found!