1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00001339.16

Cpa|evm.model.tig00001339.16 (tig00001339_g8272.t1)


Aliases : tig00001339_g8272.t1

Description : Histidine--tRNA ligase, cytoplasmic OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000761 (OrthoFinder) Phylogenetic Tree(s): OG0000761_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001339.16

Target Alias Description ECC score Gene Family Method Actions
Dusal.0387s00008.1 33202112 Anticodon-binding; Class II Histidinyl-tRNA synthetase... 0.01 OrthoFinder
EOD19932 No alias Histidyl-tRNA synthetase [Ensembl]. 0.01 OrthoFinder
Vocar.0008s0027.1 32897129 Anticodon-binding; Class II Histidinyl-tRNA synthetase... 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59903.1_6741 PRW59903 Histidyl-tRNA synthetase isoform A 0.03 OrthoFinder
lcl|LHPG02000025.1_cds_PRW20175.1_5689 PRW20175 Histidine-tRNA chloroplastic mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR041715 HisRS-like_core 15 196
IPR004154 Anticodon-bd 216 278
No external refs found!