1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00001307.14

Cpa|evm.model.tig00001307.14 (tig00001307_g8127.t1)


Aliases : tig00001307_g8127.t1

Description : Enzyme classification.EC_3 hydrolases.EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond(50.3.5 : 364.2) & Histone deacetylase 9 OS=Arabidopsis thaliana


Gene families : OG_01_0000505 (OrthoFinder) Phylogenetic Tree(s): OG0000505_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001307.14
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Cre09.g387393 30780858 Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder
EOD08428 No alias Histone deacetylase 1 [Ensembl]. 0.01 OrthoFinder
Sro388_g132310.1 Contig4393.g33005 Probable histone deacetylase 1-B 0.01 OrthoFinder
Vocar.0033s0117.1 32886389 Histone deacetylase domain [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493734.1_4496 KAA8493734 Histone deacetylase 1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0004363 glutathione synthase activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
BP GO:0006353 DNA-templated transcription, termination IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 22 203
No external refs found!