Cpa|evm.model.tig00001304.7 (tig00001304_g8109.t1)

Aliases : tig00001304_g8109.t1

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor

Gene families : OG_01_0002118 (OrthoFinder) Phylogenetic Tree(s): OG0002118_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00001304.7
Cluster	HCCA: Cluster_186

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000157.125	tig00000157_g9728.t1	RNA biosynthesis.organelle...	0.04	OrthoFinder
Cpa\|evm.model.tig00000821.15	tig00000821_g4474.t1	RNA biosynthesis.organelle...	0.04	OrthoFinder
Cre14.g611200	30776565	RNA biosynthesis.organelle...	0.02	OrthoFinder
Cz06g20210.t1	No alias	Transcription termination factor,...	0.02	OrthoFinder
XM_003060596.1	MicpuC2_60051, 60051	Transcription termination factor,...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006813	potassium ion transport	IEP	Enrichment
CC	GO:0016459	myosin complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003690	MTERF	419	526

External Links

No external refs found!